ShiftCrypt tutorial
Predict protein chemical shifts from an NMR chemical-shift assignment file.
1. Prepare input
Upload a NEF or NMR-STAR file containing assigned chemical shifts. Choose the format that matches the file, then select the chemical-shift model: full chemical-shift set, common shifts, or nitrogen and hydrogen shifts only.
Download the NEF example2. Choose numbering and submit
Keep original numbering when residue labels should match the source assignment. Submit the file and keep the browser token: it identifies the request in My predictions and is required for result downloads.
Open ShiftCrypt3. Review and export results
When processing is complete, review the residue-level prediction plots and table. Download JSON for the structured result, CSV for tabular analysis, and Metadata for the execution settings recorded with the prediction.
Use the results as a comparison aid for assigned chemical shifts; investigate unexpected values together with sequence, experimental context, and structure information.