Start2Fold

The database of hydrogen/deuterium exchange data on protein folding and stability

Entry STF0054

E.coli YOJN histidine-phosphotransferase domain

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Protein information

Name of the protein: Phosphotransferase RcsD
Organism: Escherichia coli (strain K12)
Number of residues: 116
Related UniProt entry:   P39838 (Fragment: 775 - 890)
Related PDB entry:   1SR2

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Experiment sets

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STRONG

Method: Native exchange NMR

Conditions: pH 7.0; 20.0 Celsius; Probes: all amides

Related publication:
 PMID 15476819

Experiment details: "The proton-exchange experiments were carried out on a Bruker DMX 600 spectrometer at 293 K. The 15N-labeled YojN-HPt sample was lyophilized and dissolved in the same volume of ice-cold D2O. A series of [1H,15N]-HSQC spectra were acquired every 30 minutes during the first two hours and thereafter every two hours for the following two days."

Protection threshold: residues that exhibit significant protection (no exchange for > 2 hours)

Sequence: MQEAVLQLIEVQLAQEEVTESPLGGDENAQLHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPGKQLCETLEHLIREKDVPGIEKYISDIDSYVKSLL
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STRONG residues

48: V; 49: K; 50: R; 51: L; 52: Y; 55: A; 56: A; 63: L; 64: A; 65: Q; 66: T; 67: A; 68: H; 69: R; 70: L; 71: K; 72: G; 73: V; 74: F; 75: A; 76: M; 77: L; 78: N; 79: L; 82: G; 83: K; 85: L; 86: C; 87: E; 89: L; 90: E; 92: L; 93: I; 95: E; 96: K; 97: D; 98: V; 101: I; 102: E; 103: K; 104: Y; 105: I; 106: S; 107: D; 108: I; 109: D; 110: S; 111: Y; 112: V; 113: K; 114: S; 115: L; 116: L;
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